[MSNoise] failed to run 01.scan_archive_threaded.py
Thomas Lecocq
thomas.lecocq at oma.be
Wed Oct 23 12:06:23 UTC 2013
resent (damn spam filters)
Thomas
Le 23/10/2013 13:58, Thomas Lecocq a écrit :
> Xiao,
>
> try this version, it's still using the threading logic, but it should
> be less error-prone.
>
> Thomas
>
>
> Le 23/10/2013 11:59, Thomas Lecocq a écrit :
>> Xiao,
>>
>> there is definitively something wrong with your linux machine and the
>> way to handle threads. The threading module seems to cause the memory
>> issue... I'll make a non-threaded version of the code so you can
>> test. I'll send it to the list later this afternoon !
>>
>> Cheers,
>>
>> Thomas
>>
>> Le 23/10/2013 11:57, Wang, Xiao a écrit :
>>> please see output with 1 thread:
>>>
>>> msnoise at seisapp:~/MSNoise-Temp/MSNoise-1.2$ python
>>> test.s01scan_archive.py init 1
>>> 2013-10-23 10:59:05,935 [INFO] *** Starting: Scan Archive ***
>>> mtime: -1
>>> init man!
>>> will work on 1 threads
>>> /home/msnoise/SDS/2010/3A/L002/HHE.D/3A.L002..HHE.D.2010.089
>>> Traceback (most recent call last):
>>> File "test.s01scan_archive.py", line 204, in <module>
>>> t.start()
>>> File "/home/msnoise/anaconda/lib/python2.7/threading.py", line
>>> 743, in start
>>> _start_new_thread(self.__bootstrap, ())
>>> thread.error: can't start new thread
>>> Traceback (most recent call last):
>>> File "_ctypes/callbacks.c", line 314, in 'calling callback function'
>>> File
>>> "/home/msnoise/anaconda/lib/python2.7/site-packages/obspy-0.8.4-py2.7-linux-i686.egg/obspy/mseed/core.py",
>>> line 261, in allocate_data
>>> data = np.empty(samplecount, dtype=DATATYPES[sampletype])
>>> MemoryError
>>> *** glibc detected *** python: corrupted double-linked list:
>>> 0x30fc1a10 ***
>>> ======= Backtrace: =========
>>> /lib/tls/i686/cmov/libc.so.6(+0x6b161)[0xb74c6161]
>>> /lib/tls/i686/cmov/libc.so.6(+0x6caa3)[0xb74c7aa3]
>>> /lib/tls/i686/cmov/libc.so.6(cfree+0x6d)[0xb74caa9d]
>>> /home/msnoise/anaconda/lib/python2.7/site-packages/obspy-0.8.4-py2.7-linux-i686.egg/obspy/mseed/../lib/libmseed.so(msr_free+0x6c)[0xb01db87c]
>>>
>>> /home/msnoise/anaconda/lib/python2.7/site-packages/obspy-0.8.4-py2.7-linux-i686.egg/obspy/mseed/../lib/libmseed.so(readMSEEDBuffer+0x7d1)[0xb01f0bf1]
>>>
>>> /home/msnoise/anaconda/lib/python2.7/lib-dynload/_ctypes.so(ffi_call_SYSV+0x1a)[0xb69d325e]
>>>
>>> /home/msnoise/anaconda/lib/python2.7/lib-dynload/_ctypes.so(ffi_call+0x63)[0xb69d3093]
>>>
>>> /home/msnoise/anaconda/lib/python2.7/lib-dynload/_ctypes.so(_ctypes_callproc+0x3be)[0xb69c7ece]
>>>
>>> /home/msnoise/anaconda/lib/python2.7/lib-dynload/_ctypes.so(+0x6dda)[0xb69bfdda]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyObject_Call+0x5c)[0xb75ff1cc]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyEval_EvalFrameEx+0x110a)[0xb76a465a]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyEval_EvalCodeEx+0x852)[0xb76ab5f2]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(+0x57f3c)[0xb762df3c]
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyObject_Call+0x5c)[0xb75ff1cc]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyEval_EvalFrameEx+0x3cdd)[0xb76a722d]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyEval_EvalCodeEx+0x852)[0xb76ab5f2]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(+0x57f3c)[0xb762df3c]
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyObject_Call+0x5c)[0xb75ff1cc]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyEval_EvalFrameEx+0x3cdd)[0xb76a722d]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyEval_EvalCodeEx+0x852)[0xb76ab5f2]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(+0x57f3c)[0xb762df3c]
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyObject_Call+0x5c)[0xb75ff1cc]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyEval_EvalFrameEx+0x3cdd)[0xb76a722d]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyEval_EvalCodeEx+0x852)[0xb76ab5f2]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(+0x57f3c)[0xb762df3c]
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyObject_Call+0x5c)[0xb75ff1cc]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyEval_EvalFrameEx+0x3cdd)[0xb76a722d]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyEval_EvalCodeEx+0x852)[0xb76ab5f2]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyEval_EvalFrameEx+0x607d)[0xb76a95cd]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyEval_EvalCodeEx+0x852)[0xb76ab5f2]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(+0x57f3c)[0xb762df3c]
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyObject_Call+0x5c)[0xb75ff1cc]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyEval_EvalFrameEx+0x3cdd)[0xb76a722d]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyEval_EvalFrameEx+0x61a8)[0xb76a96f8]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyEval_EvalFrameEx+0x61a8)[0xb76a96f8]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyEval_EvalCodeEx+0x852)[0xb76ab5f2]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(+0x57e5a)[0xb762de5a]
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyObject_Call+0x5c)[0xb75ff1cc]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(+0x3a165)[0xb7610165]
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyObject_Call+0x5c)[0xb75ff1cc]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(PyEval_CallObjectWithKeywords+0x54)[0xb76a2704]
>>>
>>> /home/msnoise/anaconda/lib/libpython2.7.so.1.0(+0x10e8d2)[0xb76e48d2]
>>> /lib/tls/i686/cmov/libpthread.so.0(+0x596e)[0xb75c296e]
>>> /lib/tls/i686/cmov/libc.so.6(clone+0x5e)[0xb752898e]
>>> ======= Memory map: ========
>>> 00079000-0007a000 ---p 00000000 00:00 0
>>> 0007a000-0087a000 rw-p 00000000 00:00 0
>>> 0087a000-008a1000 r-xp 00000000 08:01 4087811
>>> /home/msnoise/anaconda/lib/libm-2.5.so
>>> 008a1000-008a2000 r--p 00026000 08:01 4087811
>>> /home/msnoise/anaconda/lib/libm-2.5.so
>>> 008a2000-008a3000 rw-p 00027000 08:01 4087811
>>> /home/msnoise/anaconda/lib/libm-2.5.so
>>> 0103a000-0103b000 ---p 00000000 00:00 0
>>> 0103b000-0183b000 rw-p 00000000 00:00 0
>>> 0183b000-0183c000 ---p 00000000 00:00 0
>>> 0183c000-0203c000 rw-p 00000000 00:00 0
>>> 0203c000-0203d000 ---p 00000000 00:00 0
>>> 0203d000-0283d000 rw-p 00000000 00:00 0
>>> 0283d000-0283e000 ---p 00000000 00:00 0
>>> 0283e000-0303e000 rw-p 00000000 00:00 0
>>> 0303e000-0303f000 ---p 00000000 00:00 0
>>> 0303f000-0383f000 rw-p 00000000 00:00 0
>>> 0383f000-03840000 ---p 00000000 00:00 0
>>> 03840000-04040000 rw-p 00000000 00:00 0
>>> 04040000-04041000 ---p 00000000 00:00 0
>>> 04041000-04841000 rw-p 00000000 00:00 0
>>> 04841000-04842000 ---p 00000000 00:00 0
>>> 04842000-05042000 rw-p 00000000 00:00 0
>>> 05042000-05043000 ---p 00000000 00:00 0
>>> 05043000-05843000 rw-p 00000000 00:00 0
>>> 05843000-05844000 ---p 00000000 00:00 0
>>> 05844000-06044000 rw-p 00000000 00:00 0
>>> 06044000-06045000 ---p 00000000 00:00 0
>>> 06045000-06845000 rw-p 00000000 00:00 0
>>> 06845000-06846000 ---p 00000000 00:00 0
>>> 06846000-07046000 rw-p 00000000 00:00 0
>>> 07046000-07047000 ---p 00000000 00:00 0
>>> 07047000-07847000 rw-p 00000000 00:00 0
>>> 07847000-07848000 ---p 00000000 00:00 0
>>> 07848000-08048000 rw-p 00000000 00:00 0
>>> 08048000-08049000 r-xp 00000000 08:01 76972040
>>> /home/msnoise/anaconda/bin/python2.7
>>> 08049000-0804a000 rw-p 00000000 08:01 76972040
>>> /home/msnoise/anaconda/bin/python2.7
>>> 080b9000-09662000 rw-p 00000000 00:00 0 [heap]
>>> 09700000-097a3000 rw-p 00000000 00:00 0
>>> 097a3000-09800000 ---p 00000000 00:00 0
>>> 098f3000-098f4000 ---p 00000000 00:00 0
>>> 098f4000-0a0f4000 rw-p 00000000 00:00 0
>>> 0a0f4000-0a0f5000 ---p 00000000 00:00 0
>>> 0a0f5000-0a8f5000 rw-p 00000000 00:00 0
>>> 0a8f5000-0a8f6000 ---p 00000000 00:00 0
>>> 0a8f6000-0b0f6000 rw-p 00000000 00:00 0
>>> 0b0f6000-0b0f7000 ---p 00000000 00:00 0
>>> 0b0f7000-0b8f7000 rw-p 00000000 00:00 0
>>> 0b8f7000-0b8f8000 ---p 00000000 00:00 0
>>> 0b8f8000-0c0f8000 rw-p 00000000 00:00 0
>>> 0c0f8000-0c0f9000 ---p 00000000 00:00 0
>>> 0c0f9000-0c8f9000 rw-p 00000000 00:00 0
>>> 0c8f9000-0c8fa000 ---p 00000000 00:00 0
>>> 0c8fa000-0d0fa000 rw-p 00000000 00:00 0
>>> 0d0fa000-0d0fb000 ---p 00000000 00:00 0
>>> 0d0fb000-0d8fb000 rw-p 00000000 00:00 0
>>> 0d8fb000-0d8fc000 ---p 00000000 00:00 0
>>> 0d8fc000-0e0fc000 rw-p 00000000 00:00 0
>>> 0e0fc000-0e0fd000 ---p 00000000 00:00 0
>>> 0e0fd000-0e8fd000 rw-p 00000000 00:00 0
>>> 0e8fd000-0e8fe000 ---p 00000000 00:00 0
>>> 0e8fe000-0f0fe000 rw-p 00000000 00:00 0
>>> 0f0fe000-0f0ff000 ---p 00000000 00:00 0
>>> 0f0ff000-0f8ff000 rw-p 00000000 00:00 0
>>> 0f8ff000-0f900000 ---p 00000000 00:00 0
>>> 0f900000-10100000 rw-p 00000000 00:00 0
>>> 10100000-101ff000 rw-p 00000000 00:00 0
>>> 101ff000-10200000 ---p 00000000 00:00 0
>>> 10200000-102ff000 rw-p 00000000 00:00 0
>>> 102ff000-10300000 ---p 00000000 00:00 0
>>> 10300000-103ff000 rw-p 00000000 00:00 0
>>> 103ff000-10400000 ---p 00000000 00:00 0
>>> 104fe000-104ff000 ---p 00000000 00:00 0
>>> 104ff000-10cff000 rw-p 00000000 00:00 0
>>> 10cff000-10d00000 ---p 00000000 00:00 0 Aborted
>>>
>>>
>>>
>>> ________________________________________
>>> From: msnoise-bounces at mailman-as.oma.be
>>> [msnoise-bounces at mailman-as.oma.be] on behalf of Thomas Lecocq
>>> [thomas.lecocq at oma.be]
>>> Sent: 23 October 2013 10:55
>>> To: msnoise at mailman-as.oma.be
>>> Subject: Re: [MSNoise] failed to run 01.scan_archive_threaded.py
>>>
>>> with only 1 thread, to test?
>>>
>>> thom
>>> Le 23/10/2013 11:54, Wang, Xiao a écrit :
>>>> Please see the following output after I add up "print source":
>>>>
>>>> msnoise at seisapp:~/MSNoise-Temp/MSNoise-1.2$ python
>>>> test.s01scan_archive.py init 4
>>>> 2013-10-23 10:55:34,388 [INFO] *** Starting: Scan Archive ***
>>>> mtime: -1
>>>> init man!
>>>> will work on 4 threads
>>>> /home/msnoise/SDS/2010/3A/L002/HHE.D/3A.L002..HHE.D.2010.089
>>>> /home/msnoise/SDS/2010/3A/L002/HHE.D/3A.L002..HHE.D.2010.090
>>>> /home/msnoise/SDS/2010/3A/L002/HHE.D/3A.L002..HHE.D.2010.091
>>>> /home/msnoise/SDS/2010/3A/L002/HHE.D/3A.L002..HHE.D.2010.092
>>>> Traceback (most recent call last):
>>>> File "test.s01scan_archive.py", line 204, in <module>
>>>> t.start()
>>>> File "/home/msnoise/anaconda/lib/python2.7/threading.py", line
>>>> 743, in start
>>>> _start_new_thread(self.__bootstrap, ())
>>>> thread.error: can't start new thread
>>>> Error: msr_unpack_data((null)): Cannot allocate diff buffer
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot allocate diff buffer
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: msr_unpack(): Cannot allocate memory
>>>> Error: msr_init(): Cannot allocate memory
>>>> Error: msr_unpack_data((null)): Cannot (re)allocate memory
>>>> Error: seg_init(): Cannot allocate memory
>>>> Error: msr_init(): Cannot allocate memory
>>>> Segmentation fault
>>>>
>>>>
>>>>
>>>> ________________________________________
>>>> From: msnoise-bounces at mailman-as.oma.be
>>>> [msnoise-bounces at mailman-as.oma.be] on behalf of Thomas Lecocq
>>>> [thomas.lecocq at oma.be]
>>>> Sent: 23 October 2013 10:48
>>>> To: msnoise at mailman-as.oma.be
>>>> Subject: Re: [MSNoise] failed to run 01.scan_archive_threaded.py
>>>>
>>>> Xiao,
>>>>
>>>> edit s01scan_archive.py and add this line
>>>>
>>>> print source
>>>>
>>>> before
>>>>
>>>> data = read(source, quality=False)
>>>>
>>>> that should be at Line72.
>>>>
>>>> and send the output,
>>>>
>>>> Thom
>>>>
>>>>
>>>> Le 23/10/2013 11:42, Wang, Xiao a écrit :
>>>>> In the SDS folder, there are only mseed files, no other format files.
>>>>>
>>>>> Xiao
>>>>>
>>>>>
>>>>> -----Original Message-----
>>>>> From: msnoise-bounces at mailman-as.oma.be
>>>>> [mailto:msnoise-bounces at mailman-as.oma.be] On Behalf Of Thomas Lecocq
>>>>> Sent: 23 October 2013 10:36
>>>>> To: msnoise at mailman-as.oma.be
>>>>> Subject: Re: [MSNoise] failed to run 01.scan_archive_threaded.py
>>>>>
>>>>> Xiao,
>>>>>
>>>>>
>>>>> Le 23/10/2013 11:29, Wang, Xiao a écrit :
>>>>>> I put my SDS data files in /home/msnoise/SDS directory. In table
>>>>>> config, I set value of data_folder is /home/msnoise/SDS, value of
>>>>>> data_structure is SDS, and value of export_format is MSEED.
>>>>> This looks OK. Do you have anything else than mseed files in the
>>>>> folders ?
>>>>>
>>>>> Thomas
>>>>>> Xiao
>>>>>>
>>>>>> ________________________________________
>>>>>> From: msnoise-bounces at mailman-as.oma.be
>>>>>> [msnoise-bounces at mailman-as.oma.be] on behalf of Thomas Lecocq
>>>>>> [thomas.lecocq at oma.be]
>>>>>> Sent: 23 October 2013 10:24
>>>>>> To: msnoise at mailman-as.oma.be
>>>>>> Subject: Re: [MSNoise] failed to run 01.scan_archive_threaded.py
>>>>>>
>>>>>> Xiao,
>>>>>>
>>>>>> what is your data archive format and path ? (the configuration bits)
>>>>>>
>>>>>> Thomas
>>>>>>
>>>>>> Le 23/10/2013 11:23, Wang, Xiao a écrit :
>>>>>>> Hi Thomas,
>>>>>>>
>>>>>>> I try script python s01scan_archive.py init 4, but I still get
>>>>>>> same exception. I check database and tables of jobs, filters and
>>>>>>> data_availability are empty.
>>>>>>>
>>>>>>> Regards,
>>>>>>>
>>>>>>> Xiao
>>>>>>>
>>>>>>>
>>>>>>> Screenshot:
>>>>>>>
>>>>>>> msnoise at seisapp:~/MSNoise-Temp/MSNoise-1.2$ python
>>>>>>> s01scan_archive.py
>>>>>>> init 4
>>>>>>> 2013-10-23 10:21:32,796 [INFO] *** Starting: Scan Archive ***
>>>>>>> mtime: -1
>>>>>>> init man!
>>>>>>> will work on 4 threads
>>>>>>> 2013-10-23 10:21:33,090 [DEBUG] 3A.L002..HHE.D.2010.089: Before
>>>>>>> Start-Date! (0.25) Traceback (most recent call last):
>>>>>>> File "s01scan_archive.py", line 203, in <module>
>>>>>>> t.start()
>>>>>>> File "/home/msnoise/anaconda/lib/python2.7/threading.py",
>>>>>>> line 743, in start
>>>>>>> _start_new_thread(self.__bootstrap, ())
>>>>>>> thread.error: can't start new thread
>>>>>>> 2013-10-23 10:21:33,173 [DEBUG] 3A.L002..HHE.D.2010.090: Before
>>>>>>> Start-Date! (0.33) Traceback (most recent call last):
>>>>>>> File "_ctypes/callbacks.c", line 314, in 'calling
>>>>>>> callback function'
>>>>>>> File
>>>>>>> "/home/msnoise/anaconda/lib/python2.7/site-packages/obspy-0.8.4-py2.7-linux-i686.egg/obspy/mseed/core.py",
>>>>>>> line 261, in allocate_data
>>>>>>> data = np.empty(samplecount, dtype=DATATYPES[sampletype])
>>>>>>> MemoryError Segmentation fault
>>>>>>>
>>>>>>>
>>>>>>> ________________________________________
>>>>>>> From: msnoise-bounces at mailman-as.oma.be
>>>>>>> [msnoise-bounces at mailman-as.oma.be] on behalf of Thomas Lecocq
>>>>>>> [thomas.lecocq at oma.be]
>>>>>>> Sent: 23 October 2013 08:59
>>>>>>> To: msnoise at mailman-as.oma.be
>>>>>>> Subject: Re: [MSNoise] failed to run 01.scan_archive_threaded.py
>>>>>>>
>>>>>>> Hello Xiao,
>>>>>>>
>>>>>>> That is weird, could you test using more than 1 thread:
>>>>>>>
>>>>>>> python s01scan_archive.py init 4
>>>>>>>
>>>>>>> where 4 means 4 threads
>>>>>>>
>>>>>>>
>>>>>>> Thomas
>>>>>>>
>>>>>>> Le 22/10/2013 16:20, Wang, Xiao a écrit :
>>>>>>>> Hi Thomas,
>>>>>>>>
>>>>>>>> I downloaded MSNoise 1.2 and passed s001configurator.py and
>>>>>>>> s002populate_station_table.py. But I encountered error when I
>>>>>>>> call script python s01scan_archive.py init.
>>>>>>>>
>>>>>>>> Any idea?
>>>>>>>>
>>>>>>>> Xiao
>>>>>>>>
>>>>>>>>
>>>>>>>> The following is the screenshot:
>>>>>>>>
>>>>>>>> msnoise at seisapp:~/MSNoise-Temp/MSNoise-1.2$ python
>>>>>>>> s001configurator.py Updating Config Table Updating Station Table
>>>>>>>> Updating Filter Table Done !
>>>>>>>>
>>>>>>>> msnoise at seisapp:~/MSNoise-Temp/MSNoise-1.2$ python
>>>>>>>> s002populate_station_table.py
>>>>>>>>
>>>>>>>>>> Populating the Station table
>>>>>>>> Adding: 3A L002
>>>>>>>> Adding: 3A L003
>>>>>>>> Adding: 3A L004
>>>>>>>> Adding: 3A L005
>>>>>>>> Adding: 3A L006
>>>>>>>> Adding: 3A L007
>>>>>>>> Adding: 3A L008
>>>>>>>> Adding: 3A L009
>>>>>>>> Adding: 3A L101
>>>>>>>> Adding: 3A L102
>>>>>>>> Adding: 3A L103
>>>>>>>> Adding: 3A L104
>>>>>>>> Adding: 3A L105
>>>>>>>> Adding: 3A L106
>>>>>>>> Adding: 3A L107
>>>>>>>> Adding: 3A L201
>>>>>>>> Adding: 3A QC08
>>>>>>>> Adding: 3A QC11
>>>>>>>> Adding: 3A U16B
>>>>>>>> Adding: 3A U40B
>>>>>>>> Adding: 3A U69B
>>>>>>>> Adding: 3A UO2B
>>>>>>>>
>>>>>>>> msnoise at seisapp:~/MSNoise-Temp/MSNoise-1.2$ python
>>>>>>>> s01scan_archive.py init
>>>>>>>> 2013-10-22 15:14:14,516 [INFO] *** Starting: Scan Archive ***
>>>>>>>> mtime: -1
>>>>>>>> init man!
>>>>>>>> will work on 1 threads
>>>>>>>> Traceback (most recent call last):
>>>>>>>> File "s01scan_archive.py", line 203, in <module>
>>>>>>>> t.start()
>>>>>>>> File
>>>>>>>> "/home/msnoise/anaconda/lib/python2.7/threading.py", line 743,
>>>>>>>> in start
>>>>>>>> _start_new_thread(self.__bootstrap, ())
>>>>>>>> thread.error: can't start new thread Traceback (most recent call
>>>>>>>> last):
>>>>>>>> File "_ctypes/callbacks.c", line 314, in 'calling
>>>>>>>> callback function'
>>>>>>>> File
>>>>>>>> "/home/msnoise/anaconda/lib/python2.7/site-packages/obspy-0.8.4-py2.7-linux-i686.egg/obspy/mseed/core.py",
>>>>>>>> line 261, in allocate_data
>>>>>>>> data = np.empty(samplecount,
>>>>>>>> dtype=DATATYPES[sampletype])
>>>>>>>> MemoryError Segmentation fault
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>> Hi,
>>>>>>>>>
>>>>>>>>> Please donwload the latest MSNoise release, there are quite a
>>>>>>>>> number of bugfix and improvements on the way memory and
>>>>>>>>> threads are handled !
>>>>>>>>>
>>>>>>>>> Let me know how it goes !
>>>>>>>>>
>>>>>>>>> Thomas
>>>>>>>>>
>>>>>>>>> ps : please subscribe to the list in order to have your messages
>>>>>>>>> delivered automatically (this one went to "moderation")
>>>>>>>> _______________________________________________
>>>>>>>> MSNoise mailing list
>>>>>>>> MSNoise at mailman-as.oma.be
>>>>>>>> http://mailman-as.oma.be/mailman/listinfo/msnoise
>>>>>>> --
>>>>>>> Dr. Thomas Lecocq
>>>>>>> Geologist
>>>>>>>
>>>>>>> Seismology - Gravimetry
>>>>>>> Royal Observatory of Belgium
>>>>>>>
>>>>>>> *
>>>>>>> * * * * *
>>>>>>> * * * *
>>>>>>> ---------
>>>>>>> http://www.seismology.be
>>>>>>> http://twitter.com/#!/Seismologie_be
>>>>>>>
>>>>>>> _______________________________________________
>>>>>>> MSNoise mailing list
>>>>>>> MSNoise at mailman-as.oma.be
>>>>>>> http://mailman-as.oma.be/mailman/listinfo/msnoise
>>>>>>> _______________________________________________
>>>>>>> MSNoise mailing list
>>>>>>> MSNoise at mailman-as.oma.be
>>>>>>> http://mailman-as.oma.be/mailman/listinfo/msnoise
>>>>>> --
>>>>>> Dr. Thomas Lecocq
>>>>>> Geologist
>>>>>>
>>>>>> Seismology - Gravimetry
>>>>>> Royal Observatory of Belgium
>>>>>>
>>>>>> *
>>>>>> * * * * *
>>>>>> * * * *
>>>>>> ---------
>>>>>> http://www.seismology.be
>>>>>> http://twitter.com/#!/Seismologie_be
>>>>>>
>>>>>> _______________________________________________
>>>>>> MSNoise mailing list
>>>>>> MSNoise at mailman-as.oma.be
>>>>>> http://mailman-as.oma.be/mailman/listinfo/msnoise
>>>>>> _______________________________________________
>>>>>> MSNoise mailing list
>>>>>> MSNoise at mailman-as.oma.be
>>>>>> http://mailman-as.oma.be/mailman/listinfo/msnoise
>>>>> --
>>>>> Dr. Thomas Lecocq
>>>>> Geologist
>>>>>
>>>>> Seismology - Gravimetry
>>>>> Royal Observatory of Belgium
>>>>>
>>>>> *
>>>>> * * * * *
>>>>> * * * *
>>>>> ---------
>>>>> http://www.seismology.be
>>>>> http://twitter.com/#!/Seismologie_be
>>>>>
>>>>> _______________________________________________
>>>>> MSNoise mailing list
>>>>> MSNoise at mailman-as.oma.be
>>>>> http://mailman-as.oma.be/mailman/listinfo/msnoise
>>>>> _______________________________________________
>>>>> MSNoise mailing list
>>>>> MSNoise at mailman-as.oma.be
>>>>> http://mailman-as.oma.be/mailman/listinfo/msnoise
>>>> --
>>>> Dr. Thomas Lecocq
>>>> Geologist
>>>>
>>>> Seismology - Gravimetry
>>>> Royal Observatory of Belgium
>>>>
>>>> *
>>>> * * * * *
>>>> * * * *
>>>> ---------
>>>> http://www.seismology.be
>>>> http://twitter.com/#!/Seismologie_be
>>>>
>>>> _______________________________________________
>>>> MSNoise mailing list
>>>> MSNoise at mailman-as.oma.be
>>>> http://mailman-as.oma.be/mailman/listinfo/msnoise
>>>> _______________________________________________
>>>> MSNoise mailing list
>>>> MSNoise at mailman-as.oma.be
>>>> http://mailman-as.oma.be/mailman/listinfo/msnoise
>>> --
>>> Dr. Thomas Lecocq
>>> Geologist
>>>
>>> Seismology - Gravimetry
>>> Royal Observatory of Belgium
>>>
>>> *
>>> * * * * *
>>> * * * *
>>> ---------
>>> http://www.seismology.be
>>> http://twitter.com/#!/Seismologie_be
>>>
>>> _______________________________________________
>>> MSNoise mailing list
>>> MSNoise at mailman-as.oma.be
>>> http://mailman-as.oma.be/mailman/listinfo/msnoise
>>> _______________________________________________
>>> MSNoise mailing list
>>> MSNoise at mailman-as.oma.be
>>> http://mailman-as.oma.be/mailman/listinfo/msnoise
>>
>
--
Dr. Thomas Lecocq
Geologist
Seismology - Gravimetry
Royal Observatory of Belgium
*
* * * * *
* * * *
---------
http://www.seismology.be
http://twitter.com/#!/Seismologie_be
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