[MSNoise] Error to run compute_cc

Thomas Lecocq thomas.lecocq at oma.be
Thu Oct 9 10:29:26 UTC 2014 

Carmelo,

as long as the network name is not correct, this step will never work. 
So, please, check the data_availability table and the station tables and 
control all elements are OK. If yes, there must be another problem, but 
don't re-run the code that is not going to work, and don't paste again 
the same error.

Thomas

Le 09/10/2014 12:19, Sammarco, Carmelo a écrit :
> Dear Thomas,
>
> I try again but it doesn't works.
>
>
>   File "s03compute_cc.py", line 313, in <module>
>      X0 = s1.X
> AttributeError: 'NoneType' object has no attribute 'X'
>
>
> I was thinking that the problem was the 3). So Now i want to ask.. if i write :
>
> s1 = get_station(db, networks[0], station1.split('.')[1])
>   s2 = get_station(db, networks[0], station2.split('.')[1])
>
> in this way works... I can see a new folder 'STACK' but i don't see the folder 'Cross_correlation'. Could explain me if is it ok? If it is ok i can process the data.. if not i need to find another solution..
> Thanks.
>
> Cheers,
> -----------
> Mr Carmelo Sammarco MSc  BSc  FGS
> PhD student in Geology and Petroleum Geology
> University of Aberdeen
>
> ________________________________________
> From: msnoise-bounces at mailman-as.oma.be <msnoise-bounces at mailman-as.oma.be> on behalf of Sammarco, Carmelo <carmelosammarco at abdn.ac.uk>
> Sent: 09 October 2014 10:53
> To: msnoise at mailman-as.oma.be
> Subject: Re: [MSNoise] Error to run compute_cc
>
> Thomas,
>
> 1) The data structure is ok.
>
> 2) >> Populating the Station table
>
> Adding: YB 4623
> Adding: YB 4706
> Adding: YB 4711
> Adding: YB 4752
> Adding: YB 4903
> Adding: YB 5333
> Adding: YB 5432
> Adding: YB 5446
> Adding: YB 5478
> Adding: YB 5480
> Adding: YB 5481
> Adding: YB 5485
>
>
> 3) The content in 'net' is empty!!! Could be this the problem!!!
>
> thank you very much. Let me know what do you think..
>
> cheers,
> -----------
> Mr Carmelo Sammarco MSc  BSc  FGS
> PhD student in Geology and Petroleum Geology
> University of Aberdeen
>
> ________________________________________
> From: msnoise-bounces at mailman-as.oma.be <msnoise-bounces at mailman-as.oma.be> on behalf of Thomas Lecocq <thomas.lecocq at oma.be>
> Sent: 09 October 2014 10:15
> To: msnoise at mailman-as.oma.be
> Subject: Re: [MSNoise] Error to run compute_cc
>
> Carmelo,
>
> The network code is empty, that is the problem !
>
> 1/ Please make sure your data archive is properly defined (SDS, BUD, other).
> 2/ When you ran the "populate station table" code, did it mention
> "network.station" (eg. BE.SKQ, BE.ZEV) codes ?
> 3/ What does the data_availability table look like (the content), are
> "net, sta, comp, path, file" parameters referring to existing files ?
>
> Thomas
>
>
> Le 09/10/2014 10:58, Sammarco, Carmelo a écrit :
>> Dear Thomas,
>>
>> the line says: 2014-10-09 09:35:37,178 [DEBUG] Processing pair: .5333 vs .5432
>>
>> I change s1=.. and s2=...  like this:  please tell me what you think..
>>
>> s1 = get_station(db, networks[0], station1.split('.')[1])
>> s2 = get_station(db, networks[0], station2.split('.')[1])
>>
>>
>> my correction is ok ?? Now run!!! but I don't know if in this way it is correct. I thought to add info about station.. because in the old one there wasn't this information. Now my computer is working and I have  a new folder called 'stack' but no folder called Cross_Correlation. is it normal?? let me know..
>>
>> cheers,
>>
>> Carmelo
>>
>>
>>
>> -----------
>> Mr Carmelo Sammarco MSc  BSc  FGS
>> PhD student in Geology and Petroleum Geology
>> University of Aberdeen
>>
>> ________________________________________
>> From: msnoise-bounces at mailman-as.oma.be <msnoise-bounces at mailman-as.oma.be> on behalf of Thomas Lecocq <thomas.lecocq at oma.be>
>> Sent: 09 October 2014 08:56
>> To: msnoise at mailman-as.oma.be
>> Subject: Re: [MSNoise] Error to run compute_cc
>>
>> Carmelo,
>>
>> I asked you about the *output* of the line "logging.debug('Processing
>> pair: %s' % pair.replace(':', ' vs '))", when you run the code, in the
>> command window, the line should say which pais is being used, something
>> like:
>>
>> "[2014-10-09 ...] Processing pair: BE.SKQ vs BE.ZEV"
>>
>> This would help understanding the reasons of s1 being "None"...
>>
>> Thomas
>>
>>
>>
>> ps : please refrain from "begging" for help in your messages.
>>
>>
>> Le 08/10/2014 10:43, Sammarco, Carmelo a écrit :
>>> Dear Thomas and all,
>>>
>>> I don't find a way to resolve the problem( you can read below if you don't remember). I have the same line that you write below. The problem I think could be in the following expression:
>>>
>>> s1= ....
>>> s2=....
>>>
>>> when I print s1 or s2 they are 'None'. If before  's1=...' and 's2=...' I  write 'print pair' the terminal show me (0,1) that it is correct.
>>>
>>> what do you think?? Could be useful delete the station table and create again with the script (Populate station table)??  I hope that you will let me know..
>>> anyway thank you all guys to help me.
>>>
>>> cheers,
>>>
>>> Carmelo
>>> ________________________________________
>>> From: msnoise-bounces at mailman-as.oma.be <msnoise-bounces at mailman-as.oma.be> on behalf of Thomas Lecocq <thomas.lecocq at oma.be>
>>> Sent: 07 October 2014 16:13
>>> To: msnoise at mailman-as.oma.be
>>> Subject: Re: [MSNoise] Error to run compute_cc
>>>
>>> Carmelo,
>>>
>>> 0,1 seems OK
>>>
>>> what does this line say ?
>>>
>>> logging.debug('Processing pair: %s' % pair.replace(':', ' vs '))
>>>
>>> Thomas
>>>
>>> ps: yes, I said before, the __version__ tag is not correct, don't worry.
>>>
>>> Le 07/10/2014 17:10, Sammarco, Carmelo a écrit :
>>>> Dear Thomas,
>>>>
>>>> I did it. With the replacement of all the file nothing change. I wrote what you say.('print pair' in line 309 before s1=.. and s2=..)
>>>> The result of this print was '(0 , 1)'. I also notice that in the new init file the version is still 1.0.1.. is it normal?? I think that what show the 'print pair'  is wrong because I don't see the name of the station, right?? Let me know what you think. In the mean time I will try and try again to find a solution. thank you.
>>>>
>>>> cheers,
>>>>
>>>> Carmelo
>>>>
>>>>
>>>>
>>>> ________________________________________
>>>> From: msnoise-bounces at mailman-as.oma.be <msnoise-bounces at mailman-as.oma.be> on behalf of Thomas Lecocq <thomas.lecocq at oma.be>
>>>> Sent: 07 October 2014 15:50
>>>> To: msnoise at mailman-as.oma.be
>>>> Subject: Re: [MSNoise] Error to run compute_cc
>>>>
>>>> yeah, the __version__ tag is not correct.
>>>>
>>>> to be sure, overwrite the python files with those
>>>> https://github.com/ROBelgium/MSNoise/archive/1.2.5.zip and test.
>>>>
>>>> then if the error persists:
>>>>
>>>> add at line 309
>>>> (https://github.com/ROBelgium/MSNoise/blob/1.2.5/s03compute_cc.py#L309)
>>>>
>>>>         print pair
>>>>
>>>> and check that the stations do exist in the database?
>>>>
>>>> Thomas
>>>>
>>>> Le 07/10/2014 16:47, Sammarco, Carmelo a écrit :
>>>>> Dear Thomas,
>>>>>
>>>>> I am running the 1.0.1.  It is so an old version... I see this info on the init file(2013 version). I try also to print s1 and s2 in the script before the line where there is the error (line 313) and as you told like result I have 'none'. So in this case what do you suggest to me? Could be a bug of an old version? thank you very much for your time and support.
>>>>>
>>>>> cheers,
>>>>>
>>>>> Carmelo
>>>>> ________________________________________
>>>>> From: msnoise-bounces at mailman-as.oma.be <msnoise-bounces at mailman-as.oma.be> on behalf of Thomas Lecocq <thomas.lecocq at oma.be>
>>>>> Sent: 07 October 2014 14:57
>>>>> To: msnoise at mailman-as.oma.be
>>>>> Subject: Re: [MSNoise] Error to run compute_cc
>>>>>
>>>>> Carmelo,
>>>>>
>>>>> Looking at it in more details, the error you face is because "s1 is
>>>>> None", which should NEVER happen. Could you tell me which version you
>>>>> are using ? is it the latest tagged version ? (1.2.5) ?
>>>>>
>>>>> Thomas
>>>>>
>>>>> Le 06/10/2014 16:13, Sammarco, Carmelo a écrit :
>>>>>> Dear Thomas,
>>>>>>
>>>>>> Now i am going to correct Lat and Long.. but the components are as you told me.. the only 'Y' is in ZZ.
>>>>>> The coordinates are in degree..so there is'DEG' and no 'UTM' in the field 'coordinates' where all the stations are. Thank you very much for your help and sorry if i maybe ask too much.. but i am in the beginning..
>>>>>>
>>>>>> cheers,
>>>>>>
>>>>>> Carmelo
>>>>>> ________________________________________
>>>>>> From: msnoise-bounces at mailman-as.oma.be <msnoise-bounces at mailman-as.oma.be> on behalf of Thomas Lecocq <thomas.lecocq at oma.be>
>>>>>> Sent: 06 October 2014 14:56
>>>>>> To: Python Package for Monitoring Seismic Velocity Changes using Ambient Seismic Noise
>>>>>> Subject: Re: [MSNoise] Error to run compute_cc
>>>>>>
>>>>>> Carmelo,
>>>>>>
>>>>>> first= X=Lon and Y=Lat, usually.. but that's not your problem. I suspect
>>>>>> the components to be checked (="Y") in the configurator, while only "ZZ"
>>>>>> should be set equal to "Y", the other 8 (ZR,RT,...) set to "N" !
>>>>>>
>>>>>> Thomas
>>>>>>
>>>>>> Le 06.10.2014 15:28, Sammarco, Carmelo a écrit :
>>>>>>> Dear Thomas,
>>>>>>>
>>>>>>> As you told me I check all the parameters in the configurator. The X
>>>>>>> and Y are well populated(X=LAT / Y=LONG), I have only the ZZ job to do
>>>>>>> and I check it on the Configurator options. The error still happens. I
>>>>>>> don't know what could be.. very strange.
>>>>>>>
>>>>>>> cheers,
>>>>>>>
>>>>>>> Carmelo
>>>>>>> ________________________________________
>>>>>>> From: msnoise-bounces at mailman-as.oma.be
>>>>>>> <msnoise-bounces at mailman-as.oma.be> on behalf of Thomas Lecocq
>>>>>>> <thomas.lecocq at oma.be>
>>>>>>> Sent: 06 October 2014 12:26
>>>>>>> To: msnoise at mailman-as.oma.be
>>>>>>> Subject: Re: [MSNoise] Error to run compute_cc
>>>>>>>
>>>>>>> Carmelo,
>>>>>>>
>>>>>>> it looks like:
>>>>>>> * You are computing something else than ZZ (other components of the
>>>>>>> tensor, requiring horizontal components)
>>>>>>> * You have at least one station with no station coordinates defined in
>>>>>>> the database
>>>>>>>
>>>>>>> Check the configurator to edit the stations and ensure they have X,Y
>>>>>>> coordinates properly entered.
>>>>>>>
>>>>>>> If this is your case, are you sure you do have horizontal components
>>>>>>> for
>>>>>>> all your stations ? do files exist ?
>>>>>>>
>>>>>>> Cheers
>>>>>>>
>>>>>>> Thomas
>>>>>>>
>>>>>>> Le 06/10/2014 13:10, Sammarco, Carmelo a écrit :
>>>>>>>> Dear all,
>>>>>>>>
>>>>>>>>
>>>>>>>> When I run Compute_cc  the terminal show this message:
>>>>>>>>
>>>>>>>>
>>>>>>>> File "s03compute_cc.py", line 313, in <module>
>>>>>>>>            X0 = s1.X
>>>>>>>> AttributeError: 'NoneType' object has no attribute 'X'
>>>>>>>>
>>>>>>>> ?In which way can I fix it?? The attribute X, Y and also Z exits  in
>>>>>>>> the table and I also populate it. So I don't understand this type of
>>>>>>>> error. thank you very much. I hope to receive some answer..
>>>>>>>>
>>>>>>>> cheers,
>>>>>>>>
>>>>>>>> Carmelo
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> The University of Aberdeen is a charity registered in Scotland, No
>>>>>>>> SC013683.
>>>>>>>> Tha Oilthigh Obar Dheathain na charthannas clàraichte ann an Alba,
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