[MSNoise] New install failing mnsoise test

Kevin Davidson kdavid05 at mail.bbk.ac.uk
Mon Oct 12 14:56:36 UTC 2020


Hello, I am getting the following error when running 'msnoise test' after
following the installation documentation.

This is on Windows 10, using Python 3.7 via Anaconda.

Any suggestions as to how to fix welcome, thanks!


======================================================================
ERROR: test_025_dtt (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
  File
"d:\applications\anaconda\envs\msnoise\lib\site-packages\pandas\core\series.py",
line 1000, in __setitem__
    self._set_with_engine(key, value)
  File
"d:\applications\anaconda\envs\msnoise\lib\site-packages\pandas\core\series.py",
line 1033, in _set_with_engine
    loc = self.index._engine.get_loc(key)
  File "pandas\_libs\index.pyx", line 70, in
pandas._libs.index.IndexEngine.get_loc
  File "pandas\_libs\index.pyx", line 75, in
pandas._libs.index.IndexEngine.get_loc
TypeError: '[ 0  1  2  3  4  5  6  7  8  9 10 11 12 13 14 15 23 31 32 33 34
35 36 37 38
 39 40 41 42 43 44 45 46]' is an invalid key

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File
"d:\applications\anaconda\envs\msnoise\lib\site-packages\msnoise\test\tests.py",
line 312, in test_025_dtt
    main()
  File
"d:\applications\anaconda\envs\msnoise\lib\site-packages\msnoise\s06compute_dtt.py",
line 231, in main
    df['err'][tmp] = 1.0
  File
"d:\applications\anaconda\envs\msnoise\lib\site-packages\pandas\core\series.py",
line 1026, in __setitem__
    self._set_with(key, value)
  File
"d:\applications\anaconda\envs\msnoise\lib\site-packages\pandas\core\series.py",
line 1061, in _set_with
    self.loc[key] = value
  File
"d:\applications\anaconda\envs\msnoise\lib\site-packages\pandas\core\indexing.py",
line 666, in __setitem__
    indexer = self._get_setitem_indexer(key)
  File
"d:\applications\anaconda\envs\msnoise\lib\site-packages\pandas\core\indexing.py",
line 617, in _get_setitem_indexer
    return self._convert_to_indexer(key, axis=0, is_setter=True)
  File
"d:\applications\anaconda\envs\msnoise\lib\site-packages\pandas\core\indexing.py",
line 1198, in _convert_to_indexer
    return self._get_listlike_indexer(key, axis, raise_missing=True)[1]
  File
"d:\applications\anaconda\envs\msnoise\lib\site-packages\pandas\core\indexing.py",
line 1254, in _get_listlike_indexer
    self._validate_read_indexer(keyarr, indexer, axis,
raise_missing=raise_missing)
  File
"d:\applications\anaconda\envs\msnoise\lib\site-packages\pandas\core\indexing.py",
line 1304, in _validate_read_indexer
    raise KeyError(f"{not_found} not in index")
KeyError: '[1, 2, 3, 4, 6, 7, 8, 9, 11, 12, 13, 14, 23, 31, 32, 33, 34, 36,
37, 38, 39, 41, 42, 43, 44, 46] not in index'

----------------------------------------------------------------------
Ran 52 tests in 128.839s

FAILED (errors=1)

Bugreport:

************* Computer Report *************
----------------+PYTHON+-------------------
Python:3.7.8 | packaged by conda-forge | (default, Jul 31 2020, 01:53:57)
[MSC v.1916 64 bit (AMD64)]

This script is at
d:\applications\anaconda\envs\msnoise\lib\site-packages\msnoise\bugreport.py

---------------+MODULES+-------------------

Required:
[X] setuptools: 49.6.0.post20201009
[X] numpy: 1.19.2
[X] scipy: 1.2.1
[X] pandas: 1.1.3
[X] matplotlib: 3.3.2
[X] sqlalchemy: 1.3.19
[X] obspy: 1.2.2
[X] click: 7.1.2
[X] pymysql: 0.10.1
[X] flask: 1.1.2
[X] flask_admin: 1.5.6
[X] markdown: 3.3
[X] wtforms: 2.3.2
[X] folium: 0.11.0
[X] jinja2: 2.11.2

Only necessary if you plan to build the doc locally:
[ ] sphinx: not found
[ ] sphinx_bootstrap_theme: not found

Graphical Backends: (at least one is required)
[ ] wx: not found
[ ] pyqt: not found
[ ] PyQt4: not found
[X] PyQt5: present (no version)
[ ] PySide: not found

Not required, just checking:
[X] json: 2.0.9
[ ] psutil: not found
[ ] reportlab: not found
[ ] configobj: not found
[X] pkg_resources: present (no version)
[ ] paramiko: not found
[X] ctypes: 1.1.0
[X] pyparsing: 2.4.7
[X] distutils: 3.7.8
[ ] IPython: not found
[ ] vtk: not found
[ ] enable: not found
[ ] traitsui: not found
[ ] traits: not found
[ ] scikits.samplerate: not found


-- 
Kevin Davidson


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