[MSNoise] I got a question when I'm using MSNoise 1.6
Thomas Lecocq
Thomas.Lecocq at seismology.be
Tue May 23 14:16:14 UTC 2023
Hey,
when you say "it fails like before", you mean it's the exact same error?
It can't be...
Thomas
On 23/05/2023 16:08, Matthew Agius wrote:
> Thanks Thomas.
> I feel i have good experience with installing and running msnoise. It used
> to work until a few months ago and now it stopped. I suspect some
> library package version is not right.
>
> Thanks
> Matthew
>
>
>
>
>
> On Tue, May 23, 2023 at 4:01 PM Thomas Lecocq <Thomas.Lecocq at seismology.be>
> wrote:
>
>> Hi Matt,
>>
>> Yes, the commands will change in msnoise 2, see
>> http://msnoise.org/doc/master/ to check the "workflow" concept.
>>
>> There is no such thing as "exact versions" for msnoise, let me do some
>> more tests on different platforms & come back to you,
>>
>> Thomas
>>
>> On 23/05/2023 15:56, Matthew Agius wrote:
>>> Hi Thomas,
>>>
>>>
>>> - I uninstalled and installed msnoise. I downloaded the file and
>>> installed using pip (see below)
>>> - I did the msnoise test and unfortunately, it still fails like
>> before.
>>> Can you provide the list of packages and exact versions needed for
>> msnoise?
>>> - On another note, some commands of msnoise seem to have changed for
>>> example, msnoise db update_loc_chan gives out Usage: msnoise db
>> [OPTIONS]
>>> COMMAND [ARGS]... Try 'msnoise db --help' for help. Error: No such
>> command
>>> 'update_loc_chan'.
>>>
>>>
>>> pip uninstall msnoise --no-cache-dir
>>>
>>> wget http://msnoise.org/master.zip
>>> --2023-05-23 14:23:04-- http://msnoise.org/master.zip
>>> Resolving msnoise.org (msnoise.org)... 193.190.230.31
>>> Connecting to msnoise.org (msnoise.org)|193.190.230.31|:80... connected.
>>> HTTP request sent, awaiting response... 302 Found
>>> Location: https://github.com/ROBelgium/MSNoise/archive/master.zip
>>> [following]
>>> --2023-05-23 14:23:04--
>>> https://github.com/ROBelgium/MSNoise/archive/master.zip
>>> Resolving github.com (github.com)... 140.82.121.4
>>> Connecting to github.com (github.com)|140.82.121.4|:443... connected.
>>> HTTP request sent, awaiting response... 302 Found
>>> Location:
>>> https://codeload.github.com/ROBelgium/MSNoise/zip/refs/heads/master
>>> [following]
>>> --2023-05-23 14:23:04--
>>> https://codeload.github.com/ROBelgium/MSNoise/zip/refs/heads/master
>>> Resolving codeload.github.com (codeload.github.com)... 140.82.121.10
>>> Connecting to codeload.github.com (codeload.github.com
>> )|140.82.121.10|:443...
>>> connected.
>>> HTTP request sent, awaiting response... 200 OK
>>> Length: unspecified [application/zip]
>>> Saving to: ‘master.zip’
>>>
>>> master.zip [ <=>
>>>
>> ]
>>> 37.67M 7.98MB/s in 4.6s
>>>
>>> 2023-05-23 14:23:09 (8.24 MB/s) - ‘master.zip’ saved [39504817]
>>>
>>>
>>> (msnoise) sigma at sigma:~/Dropbox/Matthew/UOM/Projects/SIGMA/msnoise$ pip
>>> install master.zip
>>> Processing ./master.zip
>>> Preparing metadata (setup.py) ... done
>>> Requirement already satisfied: setuptools in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> msnoise==0.0.0+archive) (67.7.2)
>>> Requirement already satisfied: numpy>=1.0 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> msnoise==0.0.0+archive) (1.22.3)
>>> Requirement already satisfied: scipy in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> msnoise==0.0.0+archive) (1.7.3)
>>> Requirement already satisfied: pandas in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> msnoise==0.0.0+archive) (2.0.1)
>>> Requirement already satisfied: matplotlib in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> msnoise==0.0.0+archive) (3.5.1)
>>> Requirement already satisfied: sqlalchemy<2 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> msnoise==0.0.0+archive) (1.4.32)
>>> Requirement already satisfied: obspy in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> msnoise==0.0.0+archive) (1.3.0)
>>> Requirement already satisfied: click in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> msnoise==0.0.0+archive) (8.1.3)
>>> Requirement already satisfied: pymysql in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> msnoise==0.0.0+archive) (1.0.3)
>>> Requirement already satisfied: flask in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> msnoise==0.0.0+archive) (2.1.3)
>>> Requirement already satisfied: flask-admin in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> msnoise==0.0.0+archive) (1.6.1)
>>> Requirement already satisfied: flask-wtf in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> msnoise==0.0.0+archive) (1.1.1)
>>> Requirement already satisfied: markdown in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> msnoise==0.0.0+archive) (3.4.3)
>>> Requirement already satisfied: folium in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> msnoise==0.0.0+archive) (0.13.0)
>>> Requirement already satisfied: wtforms in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> msnoise==0.0.0+archive) (2.3.3)
>>> Requirement already satisfied: jinja2 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> msnoise==0.0.0+archive) (3.0.2)
>>> Requirement already satisfied: scandir in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> msnoise==0.0.0+archive) (1.10.0)
>>> Requirement already satisfied: logbook in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> msnoise==0.0.0+archive) (1.5.3)
>>> Requirement already satisfied: xarray in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> msnoise==0.0.0+archive) (2023.5.0)
>>> Requirement already satisfied: greenlet!=0.4.17 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> sqlalchemy<2->msnoise==0.0.0+archive) (1.1.1)
>>> Requirement already satisfied: Werkzeug>=2.0 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> flask->msnoise==0.0.0+archive) (2.0.3)
>>> Requirement already satisfied: itsdangerous>=2.0 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> flask->msnoise==0.0.0+archive) (2.0.1)
>>> Requirement already satisfied: MarkupSafe>=2.0 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> jinja2->msnoise==0.0.0+archive) (2.0.1)
>>> Requirement already satisfied: branca>=0.3.0 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> folium->msnoise==0.0.0+archive) (0.4.2)
>>> Requirement already satisfied: requests in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> folium->msnoise==0.0.0+archive) (2.27.1)
>>> Requirement already satisfied: cycler>=0.10 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> matplotlib->msnoise==0.0.0+archive) (0.11.0)
>>> Requirement already satisfied: fonttools>=4.22.0 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> matplotlib->msnoise==0.0.0+archive) (4.29.1)
>>> Requirement already satisfied: kiwisolver>=1.0.1 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> matplotlib->msnoise==0.0.0+archive) (1.3.1)
>>> Requirement already satisfied: packaging>=20.0 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> matplotlib->msnoise==0.0.0+archive) (21.3)
>>> Requirement already satisfied: pillow>=6.2.0 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> matplotlib->msnoise==0.0.0+archive) (9.0.1)
>>> Requirement already satisfied: pyparsing>=2.2.1 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> matplotlib->msnoise==0.0.0+archive) (3.0.7)
>>> Requirement already satisfied: python-dateutil>=2.7 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> matplotlib->msnoise==0.0.0+archive) (2.8.2)
>>> Requirement already satisfied: lxml in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> obspy->msnoise==0.0.0+archive) (4.8.0)
>>> Requirement already satisfied: decorator in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> obspy->msnoise==0.0.0+archive) (5.1.1)
>>> Requirement already satisfied: pytz>=2020.1 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> pandas->msnoise==0.0.0+archive) (2021.3)
>>> Requirement already satisfied: tzdata>=2022.1 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> pandas->msnoise==0.0.0+archive) (2023.3)
>>> Requirement already satisfied: six>=1.5 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> python-dateutil>=2.7->matplotlib->msnoise==0.0.0+archive) (1.16.0)
>>> Requirement already satisfied: urllib3<1.27,>=1.21.1 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> requests->folium->msnoise==0.0.0+archive) (1.26.8)
>>> Requirement already satisfied: certifi>=2017.4.17 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> requests->folium->msnoise==0.0.0+archive) (2023.5.7)
>>> Requirement already satisfied: charset-normalizer~=2.0.0 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> requests->folium->msnoise==0.0.0+archive) (2.0.12)
>>> Requirement already satisfied: idna<4,>=2.5 in
>>> /home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
>>> requests->folium->msnoise==0.0.0+archive) (3.3)
>>> Building wheels for collected packages: msnoise
>>> Building wheel for msnoise (setup.py) ... done
>>> Created wheel for msnoise:
>>> filename=msnoise-0.0.0+archive-py3-none-any.whl size=30746693
>>> sha256=7a48e4f649fe808de5b577a6f9d1dcf1304e51174eb40f059325831cd4722e7e
>>> Stored in directory:
>>>
>> /tmp/pip-ephem-wheel-cache-ur_479ur/wheels/87/89/7c/796865dd4bbe9f01da2a7015d602692ae19e12eb15405aabc7
>>> Successfully built msnoise
>>> Installing collected packages: msnoise
>>> Successfully installed msnoise-0.0.0+archive
>>>
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--
Thomas Lecocq, PhD
Head of Service a.i.
Geologist - Seismologist
Seismology - Gravimetry
Royal Observatory of Belgium
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